Atomistic mechanisms for the ordered growth of Co nano-dots on Au(788): comparison of VT-STM experiments and multi-scaled calculations

Hetero-epitaxial growth on a strain-relief vicinal patterned substrate has revealed unprecedented 2D long range ordered growth of uniform cobalt nanostructures. The morphology of a Co sub-monolayer deposit on a Au(111) reconstructed vicinal surface is analyzed by Variable Temperature Scanning Tunneling Microscopy (VT-STM) experiments. A rectangular array of nano-dots (3.8 nm x 7.2 nm) is found for a particularly large deposit temperature range lying from 60 K to 300 K. Although the nanodot lattice is stable at room temperature, this paper focus on the early stage of ordered nucleation and growth at temperatures between 35 K and 480 K. The atomistic mechanisms leading to the nanodots array are elucidated by comparing statistical analysis of VT-STM images with multi-scaled numerical calculations combining both Molecular Dynamics for the quantitative determination of the activation energies for the atomic motion and the Kinetic Monte Carlo method for the simulations of the mesoscopic time and scale evolution of the Co submonolayer

Transfer matrix solution of the Wako-Sait\^o-Mu\~noz-Eaton model augmented by arbitrary short range interactions

The Wako-Sait{\^o}-Mu\~noz-Eaton (WSME) model, initially introduced in the theory of protein folding, has also been used in modeling the RNA folding and some epitaxial phenomena. The advantage of this model is that it admits exact solution in the general inhomogeneous case (Bruscolini and Pelizzola, 2002) which facilitates the study of realistic systems. However, a shortcoming of the model is that it accounts only for interactions within continuous stretches of native bonds or atomic chains while neglecting interstretch (interchain) interactions. But due to the biopolymer (atomic chain) flexibility, the monomers (atoms) separated by several non-native bonds along the sequence can become closely spaced. This produces their strong interaction. The inclusion of non-WSME interactions into the model makes the model more realistic and improves its performance. In this study we add arbitrary interactions of finite range and solve the new model by means of the transfer matrix technique. We can therefore exactly account for the interactions which in proteomics are classified as medium- and moderately long-range ones.Comment: 15 pages, 2 figure

Imaging the symmetry breaking of molecular orbitals in carbon nanotubes

Carbon nanotubes have attracted considerable interest for their unique electronic properties. They are fascinating candidates for fundamental studies of one dimensional materials as well as for future molecular electronics applications. The molecular orbitals of nanotubes are of particular importance as they govern the transport properties and the chemical reactivity of the system. Here we show for the first time a complete experimental investigation of molecular orbitals of single wall carbon nanotubes using atomically resolved scanning tunneling spectroscopy. Local conductance measurements show spectacular carbon-carbon bond asymmetry at the Van Hove singularities for both semiconducting and metallic tubes, demonstrating the symmetry breaking of molecular orbitals in nanotubes. Whatever the tube, only two types of complementary orbitals are alternatively observed. An analytical tight-binding model describing the interference patterns of ? orbitals confirmed by ab initio calculations, perfectly reproduces the experimental results

Distribution of velocities in an avalanche

For a driven elastic object near depinning, we derive from first principles the distribution of instantaneous velocities in an avalanche. We prove that above the upper critical dimension, d >= d_uc, the n-times distribution of the center-of-mass velocity is equivalent to the prediction from the ABBM stochastic equation. Our method allows to compute space and time dependence from an instanton equation. We extend the calculation beyond mean field, to lowest order in epsilon=d_uc-d.Comment: 4 pages, 2 figure

Field cooling memory effect in Bi2212 and Bi2223 single crystals

A memory effect in the Josephson vortex system created by magnetic field in the highly anisotropic superconductors Bi2212 and Bi2223 is demonstrated using microwave power absorption. This surprising effect appears despite a very low viscosity of Josephson vortices compared to Abrikosov vortices. The superconductor is field cooled in DC magnetic field H_{m} oriented parallel to the CuO planes through the critical temperature T_{c} down to 4K, with subsequent reduction of the field to zero and again above H_{m}. Large microwave power absorption signal is observed at a magnetic field just above the cooling field clearly indicating a memory effect. The dependence of the signal on deviation of magnetic field from H_{m} is the same for a wide range of H_{m} from 0.15T to 1.7T

Self-organization of (001) cubic crystal surfaces

Self-organization on crystal surface is studied as a two dimensional spinodal decomposition in presence of a surface stress. The elastic Green function is calculated for a $(001)$ cubic crystal surface taking into account the crystal anisotropy. Numerical calculations show that the phase separation is driven by the interplay between domain boundary energy and long range elastic interactions. At late stage of the phase separation process, a steady state appears with different nanometric patterns according to the surface coverage and the crystal elastic constants

Aging dynamics of non-linear elastic interfaces: the Kardar-Parisi-Zhang equation

In this work, the out-of-equilibrium dynamics of the Kardar-Parisi-Zhang equation in (1+1) dimensions is studied by means of numerical simulations, focussing on the two-times evolution of an interface in the absence of any disordered environment. This work shows that even in this simple case, a rich aging behavior develops. A multiplicative aging scenario for the two-times roughness of the system is observed, characterized by the same growth exponent as in the stationary regime. The analysis permits the identification of the relevant growing correlation length, accounting for the important scaling variables in the system. The distribution function of the two-times roughness is also computed and described in terms of a generalized scaling relation. These results give good insight into the glassy dynamics of the important case of a non-linear elastic line in a disordered medium.Comment: 14 pages, 6 figure

Ageing memory and glassiness of a driven vortex system

Many systems in nature, glasses, interfaces and fractures being some examples, cannot equilibrate with their environment, which gives rise to novel and surprising behaviour such as memory effects, ageing and nonlinear dynamics. Unlike their equilibrated counterparts, the dynamics of out-of- equilibrium systems is generally too complex to be captured by simple macroscopic laws. Here we investigate a system that straddles the boundary between glass and crystal: a Bragg glass formed by vortices in a superconductor. We find that the response to an applied force evolves according to a stretched exponential, with the exponent reflecting the deviation from equilibrium. After the force is removed, the system ages with time and its subsequent response time scales linearly with its age (simple ageing), meaning that older systems are slower than younger ones. We show that simple ageing can occur naturally in the presence of sufficient quenched disorder. Moreover, the hierarchical distribution of timescales, arising when chunks of loose vortices cannot move before trapped ones become dislodged, leads to a stretched-exponential response.Comment: 16 pages, 5 figure

Avalanches in mean-field models and the Barkhausen noise in spin-glasses

We obtain a general formula for the distribution of sizes of "static avalanches", or shocks, in generic mean-field glasses with replica-symmetry-breaking saddle points. For the Sherrington-Kirkpatrick (SK) spin-glass it yields the density rho(S) of the sizes of magnetization jumps S along the equilibrium magnetization curve at zero temperature. Continuous replica-symmetry breaking allows for a power-law behavior rho(S) ~ 1/(S)^tau with exponent tau=1 for SK, related to the criticality (marginal stability) of the spin-glass phase. All scales of the ultrametric phase space are implicated in jump events. Similar results are obtained for the sizes S of static jumps of pinned elastic systems, or of shocks in Burgers turbulence in large dimension. In all cases with a one-step solution, rho(S) ~ S exp(-A S^2). A simple interpretation relating droplets to shocks, and a scaling theory for the equilibrium analog of Barkhausen noise in finite-dimensional spin glasses are discussed.Comment: 6 pages, 1 figur

Relaxation and reconstruction on (111) surfaces of Au, Pt, and Cu

We have theoretically studied the stability and reconstruction of (111) surfaces of Au, Pt, and Cu. We have calculated the surface energy, surface stress, interatomic force constants, and other relevant quantities by ab initio electronic structure calculations using the density functional theory (DFT), in a slab geometry with periodic boundary conditions. We have estimated the stability towards a quasi-one-dimensional reconstruction by using the calculated quantities as parameters in a one-dimensional Frenkel-Kontorova model. On all surfaces we have found an intrinsic tensile stress. This stress is large enough on Au and Pt surfaces to lead to a reconstruction in which a denser surface layer is formed, in agreement with experiment. The experimentally observed differences between the dense reconstruction pattern on Au(111) and a sparse structure of stripes on Pt(111) are attributed to the details of the interaction potential between the first layer of atoms and the substrate.Comment: 8 pages, 3 figures, submitted to Physical Review